Package: disclapmix2 0.6.2
disclapmix2: Mixtures of Discrete Laplace Distributions using Numerical Optimisation
Fit a mixture of Discrete Laplace distributions using plain numerical optimisation. This package has similar applications as the 'disclapmix' package that uses an EM algorithm.
Authors:
disclapmix2_0.6.2.tar.gz
disclapmix2_0.6.2.zip(r-4.5)disclapmix2_0.6.2.zip(r-4.4)disclapmix2_0.6.2.zip(r-4.3)
disclapmix2_0.6.2.tgz(r-4.4-x86_64)disclapmix2_0.6.2.tgz(r-4.4-arm64)disclapmix2_0.6.2.tgz(r-4.3-x86_64)disclapmix2_0.6.2.tgz(r-4.3-arm64)
disclapmix2_0.6.2.tar.gz(r-4.5-noble)disclapmix2_0.6.2.tar.gz(r-4.4-noble)
disclapmix2_0.6.2.tgz(r-4.4-emscripten)disclapmix2_0.6.2.tgz(r-4.3-emscripten)
disclapmix2.pdf |disclapmix2.html✨
disclapmix2/json (API)
NEWS
| # Install 'disclapmix2' in R: |
| install.packages('disclapmix2', repos = c('https://mkruijver.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mkruijver/disclapmix2/issues
Last updated 2 years agofrom:3905f8fd1d. Checks:OK: 9. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 03 2024 |
| R-4.5-win-x86_64 | OK | Nov 03 2024 |
| R-4.5-linux-x86_64 | OK | Nov 03 2024 |
| R-4.4-win-x86_64 | OK | Nov 03 2024 |
| R-4.4-mac-x86_64 | OK | Nov 03 2024 |
| R-4.4-mac-aarch64 | OK | Nov 03 2024 |
| R-4.3-win-x86_64 | OK | Nov 03 2024 |
| R-4.3-mac-x86_64 | OK | Nov 03 2024 |
| R-4.3-mac-aarch64 | OK | Nov 03 2024 |
Exports:disclapmix2haplotype_countsprofile_pr_by_locus_and_clusterunique_haplotype_counts
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Discrete Laplace mixture inference using Numerical Optimisation | disclapmix2 |
| Count the number of times each haplotype occurs | haplotype_counts |
| Compute Profile Probability from fit | profile_pr_by_locus_and_cluster |
| List unique haplotypes with their counts | unique_haplotype_counts |
