{ "_id": "6a51f6149b92047c28d53205", "Package": "simDNAmixtures", "Title": "Simulate Forensic DNA Mixtures", "Version": "1.1.3", "Authors@R": "person(\"Maarten\", \"Kruijver\", , \"maarten.kruijver@esr.cri.nz\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-6890-7632\"))", "Description": "Mixed DNA profiles can be sampled according to models for\nprobabilistic genotyping. Peak height variability is modelled\nusing a log normal distribution or a gamma distribution. 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"gf_configuration" ] }, { "page": "global_stutter_model", "title": "Global stutter model where the expected stutter rate is constant across alleles and loci", "topics": [ "global_stutter_model" ] }, { "page": "kits", "title": "Properties such as loci, dye, sizes for most standard forensic kits", "topics": [ "kits" ] }, { "page": "log_normal_model", "title": "Defines a log normal model for peak height variability", "topics": [ "log_normal_model" ] }, { "page": "read_allele_freqs", "title": "Read allele frequencies in FSIgen format (.csv)", "topics": [ "read_allele_freqs" ] }, { "page": "read_size_regression", "title": "Reads a size regression file", "topics": [ "read_size_regression" ] }, { "page": "read_STRmix_kit_settings", "title": "Read STRmix Kit Settings", "topics": [ "read_STRmix_kit_settings" ] }, { "page": "read_stutter_exceptions", "title": "Reads a stutter exceptions file with overrides for expected stutter ratios", "topics": [ "read_stutter_exceptions" ] }, { "page": "read_stutter_regression", "title": "Reads a stutter regression file", "topics": [ "read_stutter_regression" ] }, { "page": "read_wide_table", "title": "Read wide table (.txt) with Allele1, Allele2, ... columns as is", "topics": [ "read_wide_table" ] }, { "page": "sample_contributor_genotypes", "title": "Sample genotypes for mixture contributors according to allele frequencies", "topics": [ "sample_contributor_genotypes" ] }, { "page": "sample_drop_model", "title": "Sample drop model(s) with parameters according to priors", "topics": [ "sample_drop_model" ] }, { "page": "sample_gamma_model", "title": "Sample gamma model(s) with parameters according to priors", "topics": [ "sample_gamma_model" ] }, { "page": "sample_genotype", "title": "Sample a genotype according to allele frequencies", "topics": [ "sample_genotype" ] }, { "page": "sample_log_normal_model", "title": "Sample log normal model(s) with parameters according to priors", "topics": [ "sample_log_normal_model" ] }, { "page": "sample_log_normal_parameters", "title": "Sample log normal model parameters according to priors", "topics": [ "sample_log_normal_parameters" ] }, { "page": "sample_log_normal_stutter_variance", "title": "Sample log normal stutter variance parameters according to priors", "topics": [ "sample_log_normal_stutter_variance" ] }, { "page": "sample_LSAE", "title": "Sample Locus Specific Amplification Efficiency (LSAE) according to prior", "topics": [ "sample_LSAE" ] }, { "page": "sample_many_pedigree_genotypes", "title": "Sample (many) genotypes for pedigree members according to allele frequencies by allele dropping and possibly taking linkage into account by simulating recombination.", "topics": [ "sample_many_pedigree_genotypes" ] }, { "page": "sample_mixture_from_genotypes", "title": "Sample mixture profile with provided genotypes", "topics": [ "sample_mixture_from_genotypes" ] }, { "page": "sample_mixtures", "title": "Sample mixtures with random genotypes and random parameters according 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